HBV Target gene Detail Information

> UBE2M Gene Search Result


Gene Information
Gene Name UBE2M
Gene ID 9040
Gene Full Name ubiquitin conjugating enzyme E2 M
Gene Alias UBC12; hUbc12; UBC-RS2
Transcripts ENSG00000130725
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoplasm;Cytosol;Nuclear bodies;Nucleoli;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID P61081
HGNC ID HGNC:12491
VEGA ID OTTHUMG00000183548
OMIM ID 603173
String ID 9606.ENSP00000253023
PharmGKB ID PA37140
Target gene [UBE2M] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1001222 chr19 709 111 72 892 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of UBE2M expression and immune infiltrating cell level correlation result in HBV+ samples
UBE2M expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).