HBV Target gene Detail Information

> TUBA8 Gene Search Result


Gene Information
Gene Name TUBA8
Gene ID 51807
Gene Full Name tubulin alpha 8
Gene Alias CDCBM8; TUBAL2
Transcripts ENSG00000183785
Virus HBV
Gene Type protein coding
HPA Location Info Microtubules;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Disease related genes, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q9NY65
HGNC ID HGNC:12410
VEGA ID OTTHUMG00000150097
OMIM ID 605742
String ID 9606.ENSP00000333326
Drugbank ID BE0001359
PharmGKB ID PA37074
Target gene [TUBA8] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1005295 chr22 37 16 4 57 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of TUBA8 expression and immune infiltrating cell level correlation result in HBV+ samples
TUBA8 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).