HBV Target gene Detail Information

> TTC37 Gene Search Result


Gene Information
Gene Name TTC37
Gene ID 9652
Gene Full Name tetratricopeptide repeat domain 37
Gene Alias Ski3; THES; KIAA0372
Transcripts ENSG00000198677
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoplasm;Cytosol;
HPA Protein Class Info Disease related genes, Predicted intracellular proteins
Uniport_ID Q6PGP7
HGNC ID HGNC:23639
VEGA ID OTTHUMG00000121165
OMIM ID 614589
String ID 9606.ENSP00000351596
PharmGKB ID PA162407226
Target gene [TTC37] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1005411 chr5 44 11 55 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of TTC37 expression and immune infiltrating cell level correlation result in HBV+ samples
TTC37 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).