HBV Target gene Detail Information

> TTC33 Gene Search Result


Gene Information
Gene Name TTC33
Gene ID 23548
Gene Full Name tetratricopeptide repeat domain 33
Gene Alias OSRF
Transcripts ENSG00000113638
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoplasm;Golgi apparatus;Vesicles;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q6PID6
HGNC ID HGNC:29959
VEGA ID OTTHUMG00000131142
String ID 9606.ENSP00000338533
PharmGKB ID PA162407196
Target gene [TTC33] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1007225 chr5 25 4 29 View
1009161 chr5 10 7 17 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of TTC33 expression and immune infiltrating cell level correlation result in HBV+ samples
TTC33 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).