HTLV1 Target gene Detail Information

> TTC28 Gene Search Result


Gene Information
Gene Name TTC28
Gene ID 23331
Gene Full Name tetratricopeptide repeat domain 28
Gene Alias TPRBK
Transcripts ENSG00000100154
Virus HTLV1
Gene Type protein coding
HPA Location Info Mitochondria;Nucleoli;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q96AY4
HGNC ID HGNC:29179
VEGA ID OTTHUMG00000151006
OMIM ID 615098
String ID 9606.ENSP00000381003
PharmGKB ID PA145147752
Target gene [TTC28] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6003642 chr22 27 66 56 149 View
6004076 chr22 124 5 1 130 View
6006429 chr22 3 38 28 69 View
6014713 chr22 13 3 16 View
6019526 chr22 1 7 8 View
6022365 chr22 4 1 5 View
6023801 chr22 4 4 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).