HIV Target gene Detail Information

> TSR1 Gene Search Result


Gene Information
Gene Name TSR1
Gene ID 55720
Gene Full Name TSR1, ribosome maturation factor
Transcripts ENSG00000167721
Virus HIV
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q2NL82
HGNC ID HGNC:25542
VEGA ID OTTHUMG00000177636
OMIM ID 611214
String ID 9606.ENSP00000301364
PharmGKB ID PA142670691
Target gene [TSR1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4002228 chr17 104 104 View
4005113 chr20 28 8 36 View
4005114 chr20 28 8 36 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).