HTLV1 Target gene Detail Information

> TSPAN31 Gene Search Result

Gene Information

Gene Name	TSPAN31
Gene ID	6302
Gene Full Name	tetraspanin 31
Gene Alias	SAS
Transcripts	ENSG00000135452
Virus	HTLV1
Gene Type	protein coding
HPA Location Info	Golgi apparatus;Cytokinetic bridge;Cytosol;Nucleoplasm;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID	Q12999
HGNC ID	HGNC:10539
VEGA ID	OTTHUMG00000170381
OMIM ID	181035
String ID	9606.ENSP00000257910
PharmGKB ID	PA34949

Target gene [TSPAN31] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6013549	chr12	14	5		19	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE55851 (GEO)	Adult T-cell leukemia	21	Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)
GSE29312 (GEO)	HTLV-1 associated myelopathy	39	Normal (9), Asymptomatic carriers (HTLV1+)(20), HTLV-1-associated myelopathy (HTLV1+)(10)
GSE29332 (GEO)	HTLV-1 associated myelopathy	35	Normal (8), Asymptomatic carriers (HTLV1+)(17), HTLV-1-associated myelopathy (HTLV1+)(10)

> Dataset: GSE55851
HeatMap of cell type fractions in all samples	Lollipop of TSPAN31 expression and immune infiltrating cell level correlation result in HTLV1+ samples
TSPAN31 expression: Low -> High

> Dataset: GSE29312
HeatMap of cell type fractions in all samples	Lollipop of TSPAN31 expression and immune infiltrating cell level correlation result in HTLV1+ samples
TSPAN31 expression: Low -> High

> Dataset: GSE29332
HeatMap of cell type fractions in all samples	Lollipop of TSPAN31 expression and immune infiltrating cell level correlation result in HTLV1+ samples
TSPAN31 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).