HTLV1 Target gene Detail Information

> TSPAN18 Gene Search Result


Gene Information
Gene Name TSPAN18
Gene ID 90139
Gene Full Name tetraspanin 18
Gene Alias TSPAN
Transcripts ENSG00000157570
Virus HTLV1
Gene Type protein coding
HPA Location Info
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted membrane proteins
Uniport_ID Q96SJ8
HGNC ID HGNC:20660
VEGA ID OTTHUMG00000163883
String ID 9606.ENSP00000339820
PharmGKB ID PA142670688
Target gene [TSPAN18] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6010471 chr11 11 7 13 31 View
6010758 chr11 28 1 29 View
6020166 chr11 7 7 View
6022230 chr11 4 1 5 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).