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HBV Target gene Detail Information

> TRPM6 Gene Search Result


Gene Information
Gene Name TRPM6
Gene ID 140803
Gene Full Name transient receptor potential cation channel subfamily M member 6
Gene Alias HSH; HMGX; HOMG; CHAK2; HOMG1
Transcripts ENSG00000119121
Virus HBV
Gene Type protein coding
HPA Location Info
Membrane Info Predicted membrane proteins
HPA Protein Class Info Disease related genes, Enzymes, Plasma proteins, Potential drug targets, Predicted intracellular proteins, Predicted membrane proteins, Transporters, Voltage-gated ion channels
Uniport_ID Q9BX84
HGNC ID HGNC:17995
VEGA ID OTTHUMG00000020027
OMIM ID 607009
String ID 9606.ENSP00000354006
Drugbank ID BE0005051
PharmGKB ID PA38479
Target gene [TRPM6] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1006854 chr9 33 33 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of TRPM6 expression and immune infiltrating cell level correlation result in HBV+ samples
TRPM6 expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).