HBV Target gene Detail Information

> TRPM3 Gene Search Result


Gene Information
Gene Name TRPM3
Gene ID 80036
Gene Full Name transient receptor potential cation channel subfamily M member 3
Gene Alias GON-2; MLSN2; LTRPC3
Transcripts ENSG00000083067
Virus HBV
Gene Type protein coding
HPA Location Info Vesicles;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted intracellular proteins, Predicted membrane proteins, Transporters, Voltage-gated ion channels
Uniport_ID Q9HCF6
HGNC ID HGNC:17992
VEGA ID OTTHUMG00000019997
OMIM ID 608961
String ID 9606.ENSP00000366314
Drugbank ID BE0009987
PharmGKB ID PA38271
Target gene [TRPM3] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1019933 chr9 0 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of TRPM3 expression and immune infiltrating cell level correlation result in HBV+ samples
TRPM3 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).