HIV Target gene Detail Information

> TRPA1 Gene Search Result

Gene Information

Gene Name	TRPA1
Gene ID	8989
Gene Full Name	transient receptor potential cation channel subfamily A member 1
Gene Alias	FEPS; FEPS1; ANKTM1
Transcripts	ENSG00000104321
Virus	HIV
Gene Type	protein coding
HPA Location Info
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Disease related genes, FDA approved drug targets, Predicted membrane proteins, Transporters, Voltage-gated ion channels
Uniport_ID	O75762
HGNC ID	HGNC:497
VEGA ID	OTTHUMG00000164516
OMIM ID	604775
String ID	9606.ENSP00000262209
Drugbank ID	BE0001122
PharmGKB ID	PA24808

Target gene [TRPA1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4009601	chr8	10	1		11	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of TRPA1 expression and immune infiltrating cell level correlation result in HIV+ samples
TRPA1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).