HTLV1 Target gene Detail Information

> TRIO Gene Search Result


Gene Information
Gene Name TRIO
Gene ID 7204
Gene Full Name trio Rho guanine nucleotide exchange factor
Gene Alias tgat; MEBAS; MRD44; ARHGEF23
Transcripts ENSG00000038382
Virus HTLV1
Gene Type protein coding
HPA Location Info Cytosol;Vesicles;
HPA Protein Class Info Cancer-related genes, Disease related genes, Enzymes, Potential drug targets, Predicted intracellular proteins
Gene Function Oncogene
Uniport_ID O75962
HGNC ID HGNC:12303
VEGA ID OTTHUMG00000131057
OMIM ID 601893
String ID 9606.ENSP00000339299
PharmGKB ID PA36982
Target gene [TRIO] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6002790 chr5 120 52 36 208 View
6009071 chr5 29 10 39 View
6009072 chr5 29 10 39 View
6009073 chr5 29 10 39 View
6030075 chr5 1 1 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).