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HTLV1 Target gene Detail Information

> TRIM67 Gene Search Result


Gene Information
Gene Name TRIM67
Gene ID 440730
Gene Full Name tripartite motif containing 67
Gene Alias TNL
Transcripts ENSG00000119283
Virus HTLV1
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q6ZTA4
HGNC ID HGNC:31859
VEGA ID OTTHUMG00000037958
OMIM ID 610584
String ID 9606.ENSP00000355613
PharmGKB ID PA134947738
Target gene [TRIM67] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6002123 chr1 103 46 134 283 View
6017448 chr1 6 4 10 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE55851 (GEO) Adult T-cell leukemia 21 Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)
GSE29312 (GEO) HTLV-1 associated myelopathy 39 Normal (9), Asymptomatic carriers (HTLV1+)(20), HTLV-1-associated myelopathy (HTLV1+)(10)
GSE29332 (GEO) HTLV-1 associated myelopathy 35 Normal (8), Asymptomatic carriers (HTLV1+)(17), HTLV-1-associated myelopathy (HTLV1+)(10)

> Dataset: GSE55851

HeatMap of cell type fractions in all samples Lollipop of TRIM67 expression and immune infiltrating cell level correlation result in HTLV1+ samples
TRIM67 expression: Low -> High

> Dataset: GSE29312

HeatMap of cell type fractions in all samples Lollipop of TRIM67 expression and immune infiltrating cell level correlation result in HTLV1+ samples
TRIM67 expression: Low -> High

> Dataset: GSE29332

HeatMap of cell type fractions in all samples Lollipop of TRIM67 expression and immune infiltrating cell level correlation result in HTLV1+ samples
TRIM67 expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).