HPV Target gene Detail Information

> TRIM49B Gene Search Result


Gene Information
Gene Name TRIM49B
Gene ID 283116
Gene Full Name tripartite motif containing 49B
Transcripts ENSG00000182053
Virus HPV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID A6NDI0
HGNC ID HGNC:42955
VEGA ID OTTHUMG00000186986
String ID 9606.ENSP00000481457
PharmGKB ID PA166049088
Target gene [TRIM49B] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5403486 chr11 5 5 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).