HBV Target gene Detail Information

> TRIM48 Gene Search Result

Gene Information

Gene Name	TRIM48
Gene ID	79097
Gene Full Name	tripartite motif containing 48
Gene Alias	RNF101
Transcripts	ENSG00000150244
Virus	HBV
Gene Type	protein coding
HPA Location Info
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q8IWZ4
HGNC ID	HGNC:19021
VEGA ID	OTTHUMG00000157011
String ID	9606.ENSP00000402414
PharmGKB ID	PA134981425

Target gene [TRIM48] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1013105	chr11	5			5	View
1400338	chr11				0	View
1402693	chr11	5			5	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of TRIM48 expression and immune infiltrating cell level correlation result in HBV+ samples
TRIM48 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).