HIV Target gene Detail Information

> TRAPPC8 Gene Search Result

Gene Information

Gene Name	TRAPPC8
Gene ID	22878
Gene Full Name	trafficking protein particle complex 8
Gene Alias	GSG1; TRS85; HsT2706; KIAA1012
Transcripts	ENSG00000153339
Virus	HIV
Gene Type	protein coding
HPA Location Info	Cytosol;Microtubules;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q9Y2L5
HGNC ID	HGNC:29169
VEGA ID	OTTHUMG00000132267
OMIM ID	614136
String ID	9606.ENSP00000283351
PharmGKB ID	PA165429149

Target gene [TRAPPC8] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4008688	chr18	13	1		14	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of TRAPPC8 expression and immune infiltrating cell level correlation result in HIV+ samples
TRAPPC8 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).