HIV Target gene Detail Information

> TRAPPC13 Gene Search Result


Gene Information
Gene Name TRAPPC13
Gene ID 80006
Gene Full Name trafficking protein particle complex 13
Gene Alias SHLD3; C5orf44
Transcripts ENSG00000113597
Virus HIV
Gene Type protein coding
HPA Location Info Nucleoplasm;Plasma membrane;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID A5PLN9
HGNC ID HGNC:25828
VEGA ID OTTHUMG00000163649
String ID 9606.ENSP00000409231
PharmGKB ID PA162380280
Target gene [TRAPPC13] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4015546 chr5 1 1 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).