HIV Target gene Detail Information

> TRAPPC11 Gene Search Result

Gene Information

Gene Name	TRAPPC11
Gene ID	60684
Gene Full Name	trafficking protein particle complex 11
Gene Alias	GRY; FOIGR; LGMD2S; C4orf41; LGMDR18
Transcripts	ENSG00000168538
Virus	HIV
Gene Type	protein coding
HPA Location Info	Cytosol;Vesicles;
HPA Protein Class Info	Disease related genes, Predicted intracellular proteins
Uniport_ID	Q7Z392
HGNC ID	HGNC:25751
VEGA ID	OTTHUMG00000160673
OMIM ID	614138
String ID	9606.ENSP00000335371
PharmGKB ID	PA162379849

Target gene [TRAPPC11] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4008317	chr4	2	8	5	15	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of TRAPPC11 expression and immune infiltrating cell level correlation result in HIV+ samples
TRAPPC11 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).