HBV Target gene Detail Information

> TRAPPC10 Gene Search Result


Gene Information
Gene Name TRAPPC10
Gene ID 7109
Gene Full Name trafficking protein particle complex 10
Gene Alias EHOC1; GT334; TMEM1; TRS30; EHOC-1; TRS130
Transcripts ENSG00000160218
Virus HBV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Plasma proteins, Predicted intracellular proteins
Uniport_ID P48553
HGNC ID HGNC:11868
VEGA ID OTTHUMG00000086894
OMIM ID 602103
String ID 9606.ENSP00000291574
PharmGKB ID PA162406870
Target gene [TRAPPC10] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1006345 chr21 8 29 3 40 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of TRAPPC10 expression and immune infiltrating cell level correlation result in HBV+ samples
TRAPPC10 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).