HIV Target gene Detail Information

> TRAIP Gene Search Result

Gene Information

Gene Name	TRAIP
Gene ID	10293
Gene Full Name	TRAF interacting protein
Gene Alias	TRIP; SCKL9; RNF206
Transcripts	ENSG00000183763
Virus	HIV
Gene Type	protein coding
HPA Location Info	Cytosol;Plasma membrane;
HPA Protein Class Info	Disease related genes, Enzymes, Potential drug targets, Predicted intracellular proteins
Uniport_ID	Q9BWF2
HGNC ID	HGNC:30764
VEGA ID	OTTHUMG00000158269
OMIM ID	605958
String ID	9606.ENSP00000328203
PharmGKB ID	PA142670705

Target gene [TRAIP] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4002910	chr3	41	18	17	76	View
4003092	chr3	40	17	13	70	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of TRAIP expression and immune infiltrating cell level correlation result in HIV+ samples
TRAIP expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).