HIV Target gene Detail Information

> TRABD2A Gene Search Result

Gene Information

Gene Name	TRABD2A
Gene ID	129293
Gene Alias	TIKI1; C2orf89
Transcripts	ENSG00000186854
Virus	HIV
Gene Type	protein coding
HPA Location Info
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID	Q86V40
HGNC ID	HGNC:27013
VEGA ID	OTTHUMG00000152922
OMIM ID	614912
String ID	9606.ENSP00000387075
PharmGKB ID	PA165696373

Target gene [TRABD2A] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4000923	chr2	9	75	164	248	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of TRABD2A expression and immune infiltrating cell level correlation result in HIV+ samples
TRABD2A expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).