HIV Target gene Detail Information

> TRA Gene Search Result


Gene Information
Gene Name TRA
Gene ID 6955
Virus HIV
Gene Type protein coding
HGNC ID HGNC:12027
PharmGKB ID PA36704
Target gene [TRA] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4001854 chr14 93 18 17 128 View
4002507 chr14 50 20 21 91 View
4002526 chr14 50 24 16 90 View
4003491 chr14 60 60 View
4003971 chr14 16 31 4 51 View
4006113 chr14 5 6 16 27 View
4008876 chr14 3 4 6 13 View
4008928 chr14 8 3 2 13 View
4009012 chr14 3 8 2 13 View
4009414 chr14 6 5 11 View
4010033 chr14 10 10 View
4011359 chr14 2 3 2 7 View
4012887 chr14 2 1 1 4 View
4013265 chr14 2 2 4 View
4013429 chr14 3 3 View
4014369 chr14 1 1 2 View
4014820 chr14 2 2 View
4014821 chr14 2 2 View
4014822 chr14 2 2 View
4014823 chr14 2 2 View
4014824 chr14 2 2 View
4014825 chr14 2 2 View
4015266 chr14 1 1 View
4015965 chr14 0 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).