HIV Target gene Detail Information

> TPGS1 Gene Search Result

Gene Information

Gene Name	TPGS1
Gene ID	91978
Gene Full Name	tubulin polyglutamylase complex subunit 1
Gene Alias	PGs1; C19orf20; GTRGEO22
Transcripts	ENSG00000141933
Virus	HIV
Gene Type	protein coding
HPA Location Info
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q6ZTW0
HGNC ID	HGNC:25058
VEGA ID	OTTHUMG00000180557
String ID	9606.ENSP00000352265
PharmGKB ID	PA134901246

Target gene [TPGS1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4002214	chr19	102	3		105	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of TPGS1 expression and immune infiltrating cell level correlation result in HIV+ samples
TPGS1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).