HIV Target gene Detail Information

> TNRC6B Gene Search Result

Gene Information

Gene Name	TNRC6B
Gene ID	23112
Gene Full Name	trinucleotide repeat containing 6B
Transcripts	ENSG00000100354
Virus	HIV
Gene Type	protein coding
HPA Location Info
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q9UPQ9
HGNC ID	HGNC:29190
VEGA ID	OTTHUMG00000151114
OMIM ID	610740
String ID	9606.ENSP00000401946
PharmGKB ID	PA134992981

Target gene [TNRC6B] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4000622	chr22	209	107	24	340	View
4000930	chr22	218	10	18	246	View
4000980	chr22	212	17	5	234	View
4001129	chr22	39	91	78	208	View
4001367	chr22	137	19	16	172	View
4001730	chr22	129	6	1	136	View
4001781	chr22	101	15	16	132	View
4002080	chr22	113	1		114	View
4002148	chr22	44	1	67	112	View
4002221	chr22	100	5		105	View
4002456	chr22	42	1	53	96	View
4003456	chr22	41	15	5	61	View
4004060	chr22	47	3		50	View
4005438	chr22	15	12	5	32	View
4005757	chr22	12	7	11	30	View
4005917	chr22	22	6		28	View
4006573	chr22	12	11	1	24	View
4006755	chr22	6	17		23	View
4007621	chr22	9	5	4	18	View
4008777	chr22	11	2	1	14	View
4009033	chr22	6	7		13	View
4009391	chr22	3	8	1	12	View
4009692	chr22	7	4		11	View
4010592	chr22	5	3		8	View
4010971	chr22	3	5		8	View
4011747	chr22	4	2		6	View
4011914	chr22	6			6	View
4012159	chr22	3	2		5	View
4012602	chr22	3	2		5	View
4012974	chr22	2	2		4	View
4013200	chr22	3	1		4	View
4014449	chr22	1	1		2	View
4014450	chr22		2		2	View
4016010	chr22				0	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).