HIV Target gene Detail Information

> TNRC6A Gene Search Result


Gene Information
Gene Name TNRC6A
Gene ID 27327
Gene Full Name trinucleotide repeat containing 6A
Gene Alias GW1; FAME6; GW182; TNRC6; CAGH26
Transcripts ENSG00000288130
Virus HIV
Gene Type protein coding
HPA Location Info Golgi apparatus;Nucleoplasm;Vesicles;
HPA Protein Class Info Plasma proteins, Predicted intracellular proteins
Uniport_ID Q8NDV7
HGNC ID HGNC:11969
VEGA ID OTTHUMG00000096999
OMIM ID 610739
String ID 9606.ENSP00000379144
PharmGKB ID PA36656
Target gene [TNRC6A] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4000744 chr16 46 123 132 301 View
4001634 chr16 19 100 25 144 View
4001635 chr16 19 100 25 144 View
4001636 chr16 19 100 25 144 View
4001637 chr16 19 100 25 144 View
4005696 chr16 26 4 30 View
4006871 chr16 13 7 2 22 View
4007424 chr16 19 19 View
4009655 chr16 8 3 11 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).