HTLV1 Target gene Detail Information

> TNR Gene Search Result


Gene Information
Gene Name TNR
Gene ID 7143
Gene Full Name tenascin R
Gene Alias TN-R
Transcripts ENSG00000116147
Virus HTLV1
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Predicted intracellular proteins, Predicted secreted proteins
Uniport_ID Q92752
HGNC ID HGNC:11953
VEGA ID OTTHUMG00000034876
OMIM ID 601995
String ID 9606.ENSP00000356646
PharmGKB ID PA36642
Target gene [TNR] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6004442 chr1 57 43 15 115 View
6014247 chr1 16 1 17 View
6020286 chr1 5 1 1 7 View
6029489 chr1 1 1 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).