HIV Target gene Detail Information

> TNR Gene Search Result

Gene Information

Gene Name	TNR
Gene ID	7143
Gene Full Name	tenascin R
Gene Alias	TN-R
Transcripts	ENSG00000116147
Virus	HIV
Gene Type	protein coding
HPA Location Info
HPA Protein Class Info	Predicted intracellular proteins, Predicted secreted proteins
Uniport_ID	Q92752
HGNC ID	HGNC:11953
VEGA ID	OTTHUMG00000034876
OMIM ID	601995
String ID	9606.ENSP00000356646
PharmGKB ID	PA36642

Target gene [TNR] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4006177	chr1	10		16	26	View
4011030	chr1	2	2	3	7	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of TNR expression and immune infiltrating cell level correlation result in HIV+ samples
TNR expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).