HBV Target gene Detail Information

> TNKS Gene Search Result


Gene Information
Gene Name TNKS
Gene ID 8658
Gene Full Name tankyrase
Gene Alias TIN1; ARTD5; PARPL; TINF1; TNKS1; pART5; PARP5A; PARP-5a
Transcripts ENSG00000285372
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoplasm;Nuclear bodies;Nuclear membrane;
HPA Protein Class Info Enzymes, Predicted intracellular proteins, Transporters
Uniport_ID O95271
HGNC ID HGNC:11941
VEGA ID OTTHUMG00000090481
OMIM ID 603303
String ID 9606.ENSP00000311579
PharmGKB ID PA36631
Target gene [TNKS] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1006950 chr8 26 6 32 View
1007474 chr8 22 5 27 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of TNKS expression and immune infiltrating cell level correlation result in HBV+ samples
TNKS expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).