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HBV Target gene Detail Information

> TNFSF12-TNFSF13 Gene Search Result


Gene Information
Gene Name TNFSF12-TNFSF13
Gene ID 407977
Gene Full Name TNFSF12-TNFSF13 readthrough
Gene Alias TWE-PRIL
Transcripts ENSG00000248871
Virus HBV
Gene Type protein coding
HPA Location Info Vesicles;
HPA Protein Class Info Predicted intracellular proteins
HGNC ID HGNC:33537
VEGA ID OTTHUMG00000161573
PharmGKB ID PA162406662
Target gene [TNFSF12-TNFSF13] related to VISs
DVIDChromosomeHMTFBSCASum of Overlapped RecordsDetail
1404417 chr17 139 941 880 1960 View
Showing 1 to 1 of 1 entries
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Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of TNFSF12-TNFSF13 expression and immune infiltrating cell level correlation result in HBV+ samples
TNFSF12-TNFSF13 expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).