HBV Target gene Detail Information

> TNFSF12-TNFSF13 Gene Search Result


Gene Information
Gene Name TNFSF12-TNFSF13
Gene ID 407977
Gene Full Name TNFSF12-TNFSF13 readthrough
Gene Alias TWE-PRIL
Transcripts ENSG00000248871
Virus HBV
Gene Type protein coding
HPA Location Info Vesicles;
HPA Protein Class Info Predicted intracellular proteins
HGNC ID HGNC:33537
VEGA ID OTTHUMG00000161573
PharmGKB ID PA162406662
Target gene [TNFSF12-TNFSF13] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1404417 chr17 139 941 880 1960 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of TNFSF12-TNFSF13 expression and immune infiltrating cell level correlation result in HBV+ samples
TNFSF12-TNFSF13 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).