HIV Target gene Detail Information

> TNFAIP8 Gene Search Result


Gene Information
Gene Name TNFAIP8
Gene ID 25816
Gene Full Name TNF alpha induced protein 8
Gene Alias NDED; GG2-1; SCCS2; SCC-S2; MDC-3.13
Transcripts ENSG00000145779
Virus HIV
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID O95379
HGNC ID HGNC:17260
VEGA ID OTTHUMG00000162949
OMIM ID 612111
String ID 9606.ENSP00000427424
PharmGKB ID PA134957136
Target gene [TNFAIP8] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4003570 chr5 26 7 27 60 View
4007931 chr5 12 3 2 17 View
4010440 chr5 9 9 View
4011620 chr5 5 1 6 View
4014777 chr5 1 1 2 View
4015414 chr5 1 1 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).