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HPV Target gene Detail Information

> TMPRSS11BNL Gene Search Result


Gene Information
Gene Name TMPRSS11BNL
Gene ID 401136
Transcripts ENSG00000250026
Virus HPV
Gene Type pseudo
HPA Location Info
HGNC ID HGNC:37262
VEGA ID OTTHUMG00000160802
PharmGKB ID PA165664737
Target gene [TMPRSS11BNL] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5201427 chr4 4 4 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE140662 (GEO) Condyloma Acuminatum 8 Condyloma acuminata (HPV+)(5), Skin(3)
GSE55546 (GEO) Oropharyngeal squamous cell carcinoma 16 Oropharyngeal cancers (HPV+)(12), Normal (4)
GSE55544 (GEO) Oropharyngeal squamous cell carcinoma 23 Oropharyngeal cancers HPV Active (11), Oropharyngeal cancers HPV Inactive (4), Oropharyngeal cancers HPV Negative (8)
GSE55542 (GEO) Oropharyngeal squamous cell carcinoma 36 Oropharyngeal cancers HPV Active (12), Oropharyngeal cancers HPV Inactive (8), Oropharyngeal cancers HPV Negative (16)
HNSC (TCGA) Head and Neck squamous cell carcinoma 566 Head and Neck squamous cell carcinoma(HPV-)(483),Head and Neck squamous cell carcinoma(HPV+)(39),Paracancerous(HPV-)(44)

> Dataset: GSE140662

HeatMap of cell type fractions in all samples Lollipop of TMPRSS11BNL expression and immune infiltrating cell level correlation result in HPV+ samples
TMPRSS11BNL expression: Low -> High

> Dataset: GSE55546

HeatMap of cell type fractions in all samples Lollipop of TMPRSS11BNL expression and immune infiltrating cell level correlation result in HPV+ samples
TMPRSS11BNL expression: Low -> High

> Dataset: GSE55544

HeatMap of cell type fractions in all samples Lollipop of TMPRSS11BNL expression and immune infiltrating cell level correlation result in HPV+ samples
TMPRSS11BNL expression: Low -> High

> Dataset: GSE55542

HeatMap of cell type fractions in all samples Lollipop of TMPRSS11BNL expression and immune infiltrating cell level correlation result in HPV+ samples
TMPRSS11BNL expression: Low -> High

> Dataset: HNSC

HeatMap of cell type fractions in all samples Lollipop of TMPRSS11BNL expression and immune infiltrating cell level correlation result in HPV+ samples
TMPRSS11BNL expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).