HIV Target gene Detail Information

> TMEM50A Gene Search Result


Gene Information
Gene Name TMEM50A
Gene ID 23585
Gene Full Name transmembrane protein 50A
Gene Alias SMP1; IFNRC
Transcripts ENSG00000183726
Virus HIV
Gene Type protein coding
HPA Location Info Plasma membrane;Actin filaments;Cytosol;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted membrane proteins, Transporters
Uniport_ID O95807
HGNC ID HGNC:30590
VEGA ID OTTHUMG00000007651
OMIM ID 605348
String ID 9606.ENSP00000363478
PharmGKB ID PA142670766
Target gene [TMEM50A] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4007883 chr1 12 5 17 View
4009794 chr1 10 10 View
4010367 chr1 9 9 View
4013400 chr1 1 2 3 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).