HPV Target gene Detail Information

> TMEM260 Gene Search Result

Gene Information

Gene Name	TMEM260
Gene ID	54916
Gene Full Name	transmembrane protein 260
Gene Alias	SHDRA; C14orf101
Transcripts	ENSG00000070269
Virus	HPV
Gene Type	protein coding
HPA Location Info	Cytosol;Nucleoplasm;Focal adhesion sites;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Disease related genes, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID	Q9NX78
HGNC ID	HGNC:20185
VEGA ID	OTTHUMG00000152337
OMIM ID	617449
String ID	9606.ENSP00000261556
PharmGKB ID	PA134894829

Target gene [TMEM260] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5200110	chr14	11	36	6	53	View
5400739	chr14		3		3	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE140662 (GEO)	Condyloma Acuminatum	8	Condyloma acuminata (HPV+)(5), Skin(3)

> Dataset: GSE140662
HeatMap of cell type fractions in all samples	Lollipop of TMEM260 expression and immune infiltrating cell level correlation result in HPV+ samples
TMEM260 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).