HBV Target gene Detail Information

> TMEM217 Gene Search Result


Gene Information
Gene Name TMEM217
Gene ID 221468
Gene Full Name transmembrane protein 217
Gene Alias C6orf128; dJ355M6.2
Transcripts ENSG00000172738
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoli;Cytosol;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted membrane proteins
Uniport_ID Q8N7C4
HGNC ID HGNC:21238
VEGA ID OTTHUMG00000014618
String ID 9606.ENSP00000338164
PharmGKB ID PA162406568
Target gene [TMEM217] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1014502 chr6 3 3 View
1400938 chr6 3 3 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of TMEM217 expression and immune infiltrating cell level correlation result in HBV+ samples
TMEM217 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).