HBV Target gene Detail Information

> TMEM212 Gene Search Result


Gene Information
Gene Name TMEM212
Gene ID 389177
Transcripts ENSG00000186329
Virus HBV
Gene Type protein coding
HPA Location Info Endoplasmic reticulum;Nucleoli fibrillar center;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted membrane proteins, Transporters
Uniport_ID A6NML5
HGNC ID HGNC:34295
VEGA ID OTTHUMG00000156839
String ID 9606.ENSP00000334072
PharmGKB ID PA162406475
Target gene [TMEM212] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1006328 chr3 25 12 3 40 View
1400446 chr3 11 6 17 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of TMEM212 expression and immune infiltrating cell level correlation result in HBV+ samples
TMEM212 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).