HIV Target gene Detail Information

> TMEM209 Gene Search Result

Gene Information

Gene Name	TMEM209
Gene ID	84928
Gene Full Name	transmembrane protein 209
Gene Alias	NET31
Transcripts	ENSG00000146842
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nuclear membrane;Nuclear speckles;Vesicles;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted membrane proteins
Uniport_ID	Q96SK2
HGNC ID	HGNC:21898
VEGA ID	OTTHUMG00000157653
String ID	9606.ENSP00000380747
PharmGKB ID	PA162406425

Target gene [TMEM209] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4013738	chr7	3			3	View
4014642	chr7		1	1	2	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of TMEM209 expression and immune infiltrating cell level correlation result in HIV+ samples
TMEM209 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of TMEM209 expression and immune infiltrating cell level correlation result in HIV+ samples
TMEM209 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).