HTLV1 Target gene Detail Information

> TMEM200C Gene Search Result

Gene Information

Gene Name	TMEM200C
Gene ID	645369
Gene Full Name	transmembrane protein 200C
Gene Alias	TTMA
Transcripts	ENSG00000206432
Virus	HTLV1
Gene Type	protein coding
HPA Location Info	Microtubules;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted membrane proteins
Uniport_ID	A6NKL6
HGNC ID	HGNC:37208
VEGA ID	OTTHUMG00000178423
String ID	9606.ENSP00000463375
PharmGKB ID	PA165429148

Target gene [TMEM200C] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6006535	chr18	67			67	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE55851 (GEO)	Adult T-cell leukemia	21	Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)

> Dataset: GSE55851
HeatMap of cell type fractions in all samples	Lollipop of TMEM200C expression and immune infiltrating cell level correlation result in HTLV1+ samples
TMEM200C expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).