HTLV1 Target gene Detail Information

> TMEM183A Gene Search Result

Gene Information

Gene Name	TMEM183A
Gene ID	92703
Gene Full Name	transmembrane protein 183A
Gene Alias	C1orf37
Transcripts	ENSG00000163444
Virus	HTLV1
Gene Type	protein coding
HPA Location Info	Plasma membrane;Cell Junctions;Nucleoplasm;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted membrane proteins
Uniport_ID	Q8IXX5
HGNC ID	HGNC:20173
VEGA ID	OTTHUMG00000042051
String ID	9606.ENSP00000356211
PharmGKB ID	PA162406090

Target gene [TMEM183A] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6003675	chr1	146	1		147	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE29312 (GEO)	HTLV-1 associated myelopathy	39	Normal (9), Asymptomatic carriers (HTLV1+)(20), HTLV-1-associated myelopathy (HTLV1+)(10)

> Dataset: GSE29312
HeatMap of cell type fractions in all samples	Lollipop of TMEM183A expression and immune infiltrating cell level correlation result in HTLV1+ samples
TMEM183A expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).