HTLV1 Target gene Detail Information

> TMEM163 Gene Search Result

Gene Information

Gene Name	TMEM163
Gene ID	81615
Gene Full Name	transmembrane protein 163
Gene Alias	DC29; SV31
Transcripts	ENSG00000152128
Virus	HTLV1
Gene Type	protein coding
HPA Location Info
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted membrane proteins, Transporters
Uniport_ID	Q8TC26
HGNC ID	HGNC:25380
VEGA ID	OTTHUMG00000131713
OMIM ID	618978
String ID	9606.ENSP00000281924
PharmGKB ID	PA145148025

Target gene [TMEM163] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6000377	chr2	69	853	934	1856	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE55851 (GEO)	Adult T-cell leukemia	21	Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)
GSE29312 (GEO)	HTLV-1 associated myelopathy	39	Normal (9), Asymptomatic carriers (HTLV1+)(20), HTLV-1-associated myelopathy (HTLV1+)(10)

> Dataset: GSE55851
HeatMap of cell type fractions in all samples	Lollipop of TMEM163 expression and immune infiltrating cell level correlation result in HTLV1+ samples
TMEM163 expression: Low -> High

> Dataset: GSE29312
HeatMap of cell type fractions in all samples	Lollipop of TMEM163 expression and immune infiltrating cell level correlation result in HTLV1+ samples
TMEM163 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).