Home
Virus
Gene
Disease
Dataset
Download
Help
 
HBV Target gene Detail Information

> TMEM143 Gene Search Result


Gene Information
Gene Name TMEM143
Gene ID 55260
Gene Full Name transmembrane protein 143
Transcripts ENSG00000161558
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoli fibrillar center;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q96AN5
HGNC ID HGNC:25603
VEGA ID OTTHUMG00000183197
String ID 9606.ENSP00000293261
PharmGKB ID PA144596251
Target gene [TMEM143] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1013039 chr19 5 5 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE114783 (GEO) Chronic HBV (CHB) infection 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO) Hepatocellular carcinoma 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO) Liver cirrhosis 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: GSE114783

HeatMap of cell type fractions in all samples Lollipop of TMEM143 expression and immune infiltrating cell level correlation result in HBV+ Chronic HBV (CHB) infection samples
TMEM143 expression: Low -> High
Lollipop of TMEM143 expression and immune infiltrating cell level correlation result in HBV+ Liver cirrhosis samples Lollipop of TMEM143 expression and immune infiltrating cell level correlation result in HBV+ Hepatocellular carcinoma samples

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of TMEM143 expression and immune infiltrating cell level correlation result in HBV+ samples
TMEM143 expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).