HIV Target gene Detail Information

> TMEM116 Gene Search Result

Gene Information

Gene Name	TMEM116
Gene ID	89894
Gene Full Name	transmembrane protein 116
Transcripts	ENSG00000198270
Virus	HIV
Gene Type	protein coding
HPA Location Info	Microtubules;Nucleoplasm;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID	Q8NCL8
HGNC ID	HGNC:25084
VEGA ID	OTTHUMG00000169606
String ID	9606.ENSP00000447731
PharmGKB ID	PA143485637

Target gene [TMEM116] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4005506	chr12	28	3		31	View
4005940	chr12	28			28	View
4006631	chr12	21	1	1	23	View
4008478	chr12	5	10		15	View
4008668	chr12	12	2		14	View
4009324	chr12	7	5		12	View
4009647	chr12	8	3		11	View
4010476	chr12	8	1		9	View
4011042	chr12	4	3		7	View
4012706	chr12	3	1		4	View
4015606	chr12	1			1	View
4015865	chr12				0	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).