HPV Target gene Detail Information

> TMCO5A Gene Search Result


Gene Information
Gene Name TMCO5A
Gene ID 145942
Gene Full Name transmembrane and coiled-coil domains 5A
Gene Alias TMCO5
Transcripts ENSG00000166069
Virus HPV
Gene Type protein coding
HPA Location Info
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q8N6Q1
HGNC ID HGNC:28558
VEGA ID OTTHUMG00000129787
String ID 9606.ENSP00000327234
PharmGKB ID PA162405808
Target gene [TMCO5A] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5200094 chr15 2 2 View
5200712 chr15 0 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).