HIV Target gene Detail Information

> TMA16 Gene Search Result


Gene Information
Gene Name TMA16
Gene ID 55319
Gene Full Name translation machinery associated 16 homolog
Gene Alias C4orf43
Transcripts ENSG00000198498
Virus HIV
Gene Type protein coding
HPA Location Info Nucleoli;Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q96EY4
HGNC ID HGNC:25638
VEGA ID OTTHUMG00000161528
String ID 9606.ENSP00000351380
PharmGKB ID PA162379923
Target gene [TMA16] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4004498 chr4 26 2 15 43 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).