HTLV1 Target gene Detail Information

> TIGIT Gene Search Result


Gene Information
Gene Name TIGIT
Gene ID 201633
Gene Full Name T cell immunoreceptor with Ig and ITIM domains
Gene Alias VSIG9; VSTM3; WUCAM
Transcripts ENSG00000181847
Virus HTLV1
Gene Type protein coding
HPA Location Info
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted membrane proteins
Uniport_ID Q495A1
HGNC ID HGNC:26838
VEGA ID OTTHUMG00000159331
OMIM ID 612859
String ID 9606.ENSP00000419085
PharmGKB ID PA164726482
Target gene [TIGIT] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6000988 chr3 285 313 58 656 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE55851 (GEO) Adult T-cell leukemia 21 Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)

> Dataset: GSE55851

HeatMap of cell type fractions in all samples Lollipop of TIGIT expression and immune infiltrating cell level correlation result in HTLV1+ samples
TIGIT expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).