HBV Target gene Detail Information

> TGM3 Gene Search Result


Gene Information
Gene Name TGM3
Gene ID 7053
Gene Full Name transglutaminase 3
Gene Alias TGE; UHS2
Transcripts ENSG00000125780
Virus HBV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Disease related genes, Enzymes, Plasma proteins, Potential drug targets, Predicted intracellular proteins
Gene Function Suppressor gene & Oncogene
Uniport_ID Q08188
HGNC ID HGNC:11779
VEGA ID OTTHUMG00000031690
OMIM ID 600238
String ID 9606.ENSP00000370867
Drugbank ID BE0001273
PharmGKB ID PA36492
Target gene [TGM3] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1013051 chr20 5 5 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of TGM3 expression and immune infiltrating cell level correlation result in HBV+ samples
TGM3 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).