HIV Target gene Detail Information

> TDRD1 Gene Search Result

Gene Information

Gene Name	TDRD1
Gene ID	56165
Gene Full Name	tudor domain containing 1
Gene Alias	CT41.1
Transcripts	ENSG00000095627
Virus	HIV
Gene Type	protein coding
HPA Location Info
HPA Protein Class Info	Plasma proteins, Predicted intracellular proteins
Uniport_ID	Q9BXT4
HGNC ID	HGNC:11712
VEGA ID	OTTHUMG00000019083
OMIM ID	605796
String ID	9606.ENSP00000251864
PharmGKB ID	PA36430

Target gene [TDRD1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4008594	chr10	14			14	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of TDRD1 expression and immune infiltrating cell level correlation result in HIV+ samples
TDRD1 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of TDRD1 expression and immune infiltrating cell level correlation result in HIV+ samples
TDRD1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).