HBV Target gene Detail Information

> TCTN1 Gene Search Result

Gene Information

Gene Name	TCTN1
Gene ID	79600
Gene Full Name	tectonic family member 1
Gene Alias	TECT1; JBTS13
Transcripts	ENSG00000204852
Virus	HBV
Gene Type	protein coding
HPA Location Info	Actin filaments;Nucleoplasm;
HPA Protein Class Info	Disease related genes, Predicted intracellular proteins
Uniport_ID	Q2MV58
HGNC ID	HGNC:26113
VEGA ID	OTTHUMG00000150051
OMIM ID	609863
String ID	9606.ENSP00000380779
PharmGKB ID	PA162405437

Target gene [TCTN1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1009577	chr12	15			15	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of TCTN1 expression and immune infiltrating cell level correlation result in HBV+ samples
TCTN1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).