HBV Target gene Detail Information

> TCF7L1 Gene Search Result


Gene Information
Gene Name TCF7L1
Gene ID 83439
Gene Full Name transcription factor 7 like 1
Gene Alias TCF3; TCF-3
Transcripts ENSG00000152284
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoplasm;Cytosol;
HPA Protein Class Info Predicted intracellular proteins, Transcription factors
Uniport_ID Q9HCS4
HGNC ID HGNC:11640
VEGA ID OTTHUMG00000130026
OMIM ID 604652
String ID 9606.ENSP00000282111
PharmGKB ID PA36393
Target gene [TCF7L1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1008493 chr2 15 5 20 View
1402248 chr2 15 5 20 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of TCF7L1 expression and immune infiltrating cell level correlation result in HBV+ samples
TCF7L1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).