HIV Target gene Detail Information

> TCF20 Gene Search Result

Gene Information

Gene Name	TCF20
Gene ID	6942
Gene Full Name	transcription factor 20
Gene Alias	AR1; SPBP; TCF-20
Transcripts	ENSG00000262024
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;Nuclear bodies;
HPA Protein Class Info	Plasma proteins, Predicted intracellular proteins
Uniport_ID	Q9UGU0
HGNC ID	HGNC:11631
VEGA ID	OTTHUMG00000189886
OMIM ID	603107
String ID	9606.ENSP00000352463
PharmGKB ID	PA36386

Target gene [TCF20] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4002823	chr22	73	4	1	78	View
4004293	chr22	14	24	8	46	View
4005538	chr22	31			31	View
4008243	chr22	4	11	1	16	View
4011417	chr22	7			7	View
4011916	chr22	3	3		6	View
4011917	chr22	6			6	View
4012977	chr22	4			4	View
4014759	chr22	1	1		2	View
4015539	chr22	1			1	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of TCF20 expression and immune infiltrating cell level correlation result in HIV+ samples
TCF20 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of TCF20 expression and immune infiltrating cell level correlation result in HIV+ samples
TCF20 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).