HIV Target gene Detail Information

> TCF19 Gene Search Result

Gene Information

Gene Name	TCF19
Gene ID	6941
Gene Full Name	transcription factor 19
Gene Alias	SC1; TCF-19
Transcripts	ENSG00000224472
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;Nucleoli;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q9Y242
HGNC ID	HGNC:11629
VEGA ID	OTTHUMG00000149950
OMIM ID	600912
String ID	9606.ENSP00000365433
PharmGKB ID	PA36384

Target gene [TCF19] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4001612	chr6	75	53	19	147	View
4001680	chr6	80	50	11	141	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of TCF19 expression and immune infiltrating cell level correlation result in HIV+ samples
TCF19 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).